ewoksfluo.io.hdf5#

Functions

is_dataset(item)

is_file(item)

is_group(item)

is_same_file(url1, url2)

join_h5url(root_url, sub_url)

retry_external_link(group, name[, item])

The file we save results in is opened in append mode.

split_h5data_path(data_path)

split_h5uri(url)

Classes

FileModExtAccess(filename, **open_options)

Wrapper around an h5py_utils.File that ensures any h5py.ExternalLink is opened with alternative access parameters.

FileReadAccess(filename[, mode])

Use in cases where you want to read something from an HDF5 which might be already open for writing.

GroupModExtAccess(native_group, file_wrapper)

Wrapper around h5py.Group that delegates path resolution to the owning FileModExtAccess.

ReadHdf5File(*args, **kwargs)